BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B09LP1|AL428336
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1284 1693 0.0
>3x_Contig1284
Length = 6170
Score = 1693 bits (854), Expect = 0.0
Identities = 869/873 (99%), Gaps = 1/873 (0%)
Strand = Plus / Plus
Query: 1 agtcatgtttggagtcaggtcatatcctccaaggaacaatctgatgggaatagtctctcc 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2878 agtcatgtttggagttaggtcatatcctccaaggaacaatctgatgggaatagtctctcc 2937
Query: 61 cttgactggagagccgtccatgatttcatatcttatcgaagtcgtatctgacaattgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2938 cttgactggagagccgtccatgatttcatatcttatcgaagtcgtatctgacaattgatt 2997
Query: 121 tggttctgtcccgcatgtttcccttttgattagactcaattccatatgttttacttttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2998 tggttctgtcccgcatgtttcccttttgattagactcaattccatatgttttacttttaa 3057
Query: 181 tctggtaagcagaaaatatatccttccaactataacatcttttaacgtgtgttgtgcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3058 tctggtaagcagaaaatatatccttccaactataacatcttttaacgtgtgttgtgcctt 3117
Query: 241 tgagtattcgaactctatatgaagacagttttcaattccgatatctaattttattggttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3118 tgagtattcgaactctatatgaagacagttttcaattccgatatctaattttattggttt 3177
Query: 301 accctcattatccttaatagaggattcattagcatacctatgacaccagaacttcttcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3178 accctcattatccttaatagaggattcattagcatacctatgacaccagaacttcttcaa 3237
Query: 361 ttttactatatcagccgattttcttatcattgtaactttaatataatacattacagatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3238 ttttactatatcagccgattttcttatcattgtaactttaatataatacattacagatac 3297
Query: 421 gttcttacccaagtaactttcaaatcgtttttctacatccttaaagttgaatttgtaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3298 gttcttacccaagtaactttcaaatcgtttttctacatccttaaagttgaatttgtaatt 3357
Query: 481 aacagaatgtactaattcaccaggaggacacaaatccatgcttaatgtcaaaaaggtatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3358 aacagaatgtactaattcaccaggaggacacaaatccatgcttaatgtcaaaaaggtatc 3417
Query: 541 tagatttttattcttcacgtcgttgttataaccagttgtatcaatactaccaatcaatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3418 tagatttttattcttcacgtcgttgttataaccagttgtatcaatactaccaatcaatga 3477
Query: 601 aactttgatacctgaatgttcaagtttcttcccttctctgacacgcagtatnancaagcc 660
||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||
Sbjct: 3478 aactttgatacctgaatgttcaagtttcttcccttctctgacacgcagtgtta-caagcc 3536
Query: 661 cagtcacactctccccatcttcaaataacggatatttatcaaataaactctttgccgagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3537 cagtcacactctccccatcttcaaataacggatatttatcaaataaactctttgccgagt 3596
Query: 721 gagaattggtagggatctcgacatgttttctcgaatcctcaccatcaaataggatttcta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3597 gagaattggtagggatctcgacatgttttctcgaatcctcaccatcaaataggatttcta 3656
Query: 781 tatcaactggattcttgtagaaaagtgacatattacgttaagatttcggcgtactcccca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3657 tatcaactggattcttgtagaaaagtgacatattacgttaagatttcggcgtactcccca 3716
Query: 841 cgaaagaatcaaatatagtgaataaatagatat 873
|||||||||||||||||||||||||||||||||
Sbjct: 3717 cgaaagaatcaaatatagtgaataaatagatat 3749
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7151
Number of Sequences: 1807
Number of extensions: 7151
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)